Index

A

accuracy_score() (in module pytranskit.optrans.decomposition.plda) add_trans_samples() (pytranskit.classification.cdt_ns.CDT_NS method) (pytranskit.classification.rcdt_ns.RCDT_NS method) (pytranskit.classification.rcdt_ns_3d.RCDT_NS_3D method) (pytranskit.classification.scdt_ns.SCDT_NS method) apply_forward_map() (pytranskit.optrans.continuous.base.BaseMapper2D method) (pytranskit.optrans.continuous.base.BaseTransform method) (pytranskit.optrans.continuous.cdt.BaseTransform method) (pytranskit.optrans.continuous.cdt.CDT method) (pytranskit.optrans.continuous.clot.CDT method) (pytranskit.optrans.continuous.clot.CLOT method) (pytranskit.optrans.continuous.radoncdt.BaseTransform method) (pytranskit.optrans.continuous.radoncdt.CDT method) (pytranskit.optrans.continuous.radoncdt.RadonCDT method) (pytranskit.optrans.continuous.radoncdt3D.BaseTransform method) (pytranskit.optrans.continuous.radoncdt3D.CDT method) apply_inverse_map() (pytranskit.optrans.continuous.base.BaseMapper2D method) (pytranskit.optrans.continuous.base.BaseTransform method) (pytranskit.optrans.continuous.cdt.BaseTransform method) (pytranskit.optrans.continuous.cdt.CDT method) (pytranskit.optrans.continuous.clot.CDT method) (pytranskit.optrans.continuous.clot.CLOT method) (pytranskit.optrans.continuous.radoncdt.BaseTransform method) (pytranskit.optrans.continuous.radoncdt.CDT method) (pytranskit.optrans.continuous.radoncdt.RadonCDT method) (pytranskit.optrans.continuous.radoncdt3D.BaseTransform method) (pytranskit.optrans.continuous.radoncdt3D.CDT method) (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method)

assert_all_finite() (in module pytranskit.optrans.utils.validation) assert_equal_shape() (in module pytranskit.optrans.continuous.base) (in module pytranskit.optrans.continuous.cdt) (in module pytranskit.optrans.continuous.clot) (in module pytranskit.optrans.continuous.radoncdt) (in module pytranskit.optrans.continuous.radoncdt3D) (in module pytranskit.optrans.utils.validation)

B

BaseEstimator (class in pytranskit.optrans.decomposition.plda) BaseMapper2D (class in pytranskit.optrans.continuous.base) BaseTransform (class in pytranskit.optrans.continuous.base) (class in pytranskit.optrans.continuous.cdt) (class in pytranskit.optrans.continuous.radoncdt) (class in pytranskit.optrans.continuous.radoncdt3D)

batch_PLOT (class in pytranskit.TBM.TBM_PLOT) batch_PLOT_v0 (class in pytranskit.TBM.TBM_PLOT) batch_RCDT (class in pytranskit.TBM.TBM_RCDT)

C

calc_scdt() (pytranskit.classification.scdt_nls.SCDT_NLS method) (pytranskit.classification.scdt_ns.SCDT_NS method) (pytranskit.optrans.continuous.scdt.SCDT method) CanonCorr (in module pytranskit.optrans.decomposition.cca) CCA (class in pytranskit.optrans.decomposition.cca) CDT (class in pytranskit.optrans.continuous.cdt) (class in pytranskit.optrans.continuous.clot) (class in pytranskit.optrans.continuous.radoncdt) (class in pytranskit.optrans.continuous.radoncdt3D) CDT_NS (class in pytranskit.classification.cdt_ns) cdt_parallel() (pytranskit.classification.cdt_ns.CDT_NS method) check_array() (in module pytranskit.optrans.continuous.base) (in module pytranskit.optrans.continuous.cdt) (in module pytranskit.optrans.continuous.clot) (in module pytranskit.optrans.continuous.radoncdt) (in module pytranskit.optrans.continuous.radoncdt3D) (in module pytranskit.optrans.decomposition.cca) (in module pytranskit.optrans.decomposition.plda) (in module pytranskit.optrans.utils.validation)

check_decomposition() (in module pytranskit.optrans.utils.validation) class_means_ (pytranskit.optrans.decomposition.plda.PLDA attribute) classes_ (pytranskit.optrans.decomposition.plda.PLDA attribute) classify_PLOT_NS() (pytranskit.TBM.TBM_PLOT.PLOT_NS_Classifier method) classify_RCDT_NS() (pytranskit.TBM.TBM_RCDT.RCDT_NS_Classifier method) CLOT (class in pytranskit.optrans.continuous.clot) coef_ (pytranskit.optrans.decomposition.plda.PLDA attribute) components_ (pytranskit.optrans.decomposition.cca.CCA attribute) (pytranskit.optrans.decomposition.plda.PLDA attribute) components_y_ (pytranskit.optrans.decomposition.cca.CCA attribute) cost_ (pytranskit.optrans.continuous.clot.CLOT attribute) curl_ (pytranskit.optrans.continuous.clot.CLOT attribute)

D

dataset_config() (in module pytranskit.classification.utils) dct() (in module pytranskit.optrans.continuous.clot) decision_function() (pytranskit.optrans.decomposition.plda.PLDA method) displacements_ (pytranskit.optrans.continuous.cdt.CDT attribute) (pytranskit.optrans.continuous.clot.CDT attribute) (pytranskit.optrans.continuous.clot.CLOT attribute) (pytranskit.optrans.continuous.radoncdt.CDT attribute) (pytranskit.optrans.continuous.radoncdt.RadonCDT attribute) (pytranskit.optrans.continuous.radoncdt3D.CDT attribute)

displacements_initial_ (pytranskit.optrans.continuous.clot.CLOT attribute) dRamp() (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method)

E

eigh() (in module pytranskit.optrans.decomposition.plda) enrichment() (pytranskit.classification.scdt_nls.SCDT_NLS method) explained_variance_ (pytranskit.optrans.decomposition.cca.CCA attribute) (pytranskit.optrans.decomposition.plda.PLDA attribute)

explained_variance_ratio_ (pytranskit.optrans.decomposition.plda.PLDA attribute) explained_variance_y_ (pytranskit.optrans.decomposition.cca.CCA attribute)

F

fft() (in module pytranskit.optrans.continuous.radoncdt3D) fftshift() (in module pytranskit.optrans.continuous.radoncdt3D) find_kN() (pytranskit.classification.scdt_nls.SCDT_NLS method) fit() (pytranskit.classification.cdt_ns.CDT_NS method) (pytranskit.classification.rcdt_ns.RCDT_NS method) (pytranskit.classification.rcdt_ns_3d.RCDT_NS_3D method) (pytranskit.classification.scdt_nls.SCDT_NLS method) (pytranskit.classification.scdt_ns.SCDT_NS method) (pytranskit.optrans.decomposition.cca.CCA method) (pytranskit.optrans.decomposition.plda.PLDA method) (pytranskit.TBM.TBM_PLOT.PLOT_NS_Classifier method) (pytranskit.TBM.TBM_RCDT.RCDT_NS_Classifier method) fit_transform() (pytranskit.optrans.decomposition.cca.CCA method) (pytranskit.optrans.decomposition.plda.PLDA method) forward() (pytranskit.optrans.continuous.base.BaseTransform method) (pytranskit.optrans.continuous.cdt.BaseTransform method) (pytranskit.optrans.continuous.cdt.CDT method) (pytranskit.optrans.continuous.clot.CDT method) (pytranskit.optrans.continuous.clot.CLOT method) (pytranskit.optrans.continuous.radoncdt.BaseTransform method) (pytranskit.optrans.continuous.radoncdt.CDT method) (pytranskit.optrans.continuous.radoncdt.RadonCDT method) (pytranskit.optrans.continuous.radoncdt3D.BaseTransform method) (pytranskit.optrans.continuous.radoncdt3D.CDT method) (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method) (pytranskit.TBM.TBM_RCDT.batch_RCDT method)

forward_seq() (pytranskit.TBM.TBM_PLOT.batch_PLOT method) (pytranskit.TBM.TBM_PLOT.batch_PLOT_v0 method) (pytranskit.TBM.TBM_RCDT.batch_RCDT method) fromInd2Coord() (in module pytranskit.TBM.TBM_PLOT) fun_cdt_batch() (pytranskit.classification.cdt_ns.CDT_NS method) fun_cdt_single() (pytranskit.classification.cdt_ns.CDT_NS method) fun_ircdt_batch() (pytranskit.TBM.TBM_RCDT.batch_RCDT method) fun_ircdt_single() (pytranskit.TBM.TBM_RCDT.batch_RCDT method) fun_rcdt_batch() (pytranskit.classification.rcdt_ns.RCDT_NS method) (pytranskit.classification.rcdt_ns_3d.RCDT_NS_3D method) (pytranskit.TBM.TBM_RCDT.batch_RCDT method) fun_rcdt_single() (pytranskit.classification.rcdt_ns.RCDT_NS method) (pytranskit.classification.rcdt_ns_3d.RCDT_NS_3D method) (pytranskit.TBM.TBM_RCDT.batch_RCDT method)

G

gaussian2D() (in module pytranskit.TBM.TBM_PLOT) gen_inverse() (pytranskit.optrans.continuous.scdt.SCDT method) get_params() (pytranskit.optrans.decomposition.plda.BaseEstimator method) get_particles() (in module pytranskit.TBM.TBM_PLOT)

get_rotation_matrix() (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method) griddata2d() (in module pytranskit.optrans.continuous.base) (in module pytranskit.optrans.continuous.clot) (in module pytranskit.optrans.utils.data_utils)

I

idct() (in module pytranskit.optrans.continuous.clot) ifft() (in module pytranskit.optrans.continuous.radoncdt3D) img2pts_Lloyd() (in module pytranskit.TBM.TBM_PLOT) intercept_ (pytranskit.optrans.decomposition.plda.PLDA attribute) interp() (in module pytranskit.optrans.continuous.cdt) (in module pytranskit.optrans.continuous.scdt) interp2d() (in module pytranskit.optrans.continuous.base) (in module pytranskit.optrans.continuous.clot) (in module pytranskit.optrans.utils.data_utils) inverse() (pytranskit.optrans.continuous.base.BaseTransform method) (pytranskit.optrans.continuous.cdt.BaseTransform method) (pytranskit.optrans.continuous.cdt.CDT method) (pytranskit.optrans.continuous.clot.CDT method) (pytranskit.optrans.continuous.radoncdt.BaseTransform method) (pytranskit.optrans.continuous.radoncdt.CDT method) (pytranskit.optrans.continuous.radoncdt.RadonCDT method) (pytranskit.optrans.continuous.radoncdt3D.BaseTransform method) (pytranskit.optrans.continuous.radoncdt3D.CDT method) (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method) (pytranskit.TBM.TBM_RCDT.batch_RCDT method)

inverse_transform() (pytranskit.optrans.decomposition.cca.CCA method) (pytranskit.optrans.decomposition.plda.PLDA method) iradon() (in module pytranskit.optrans.continuous.radoncdt) iradon_3D() (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method) ircdt_parallel() (pytranskit.TBM.TBM_RCDT.batch_RCDT method) istransform() (pytranskit.optrans.continuous.scdt.SCDT method) itransform() (pytranskit.optrans.continuous.scdt.SCDT method)

L

L2_distance() (in module pytranskit.TBM.TBM_PLOT) load_data() (in module pytranskit.classification.utils)

load_data_1D() (in module pytranskit.classification.utils) load_data_3D() (in module pytranskit.classification.utils)

M

match_shape2d() (in module pytranskit.optrans.continuous.radoncdt) (in module pytranskit.optrans.utils.data_utils) mean_ (pytranskit.optrans.decomposition.cca.CCA attribute) (pytranskit.optrans.decomposition.plda.PLDA attribute) mean_y_ (pytranskit.optrans.decomposition.cca.CCA attribute) module pytranskit.classification.cdt_ns pytranskit.classification.rcdt_ns pytranskit.classification.rcdt_ns_3d pytranskit.classification.scdt_nls pytranskit.classification.scdt_ns pytranskit.classification.utils pytranskit.optrans.continuous.base pytranskit.optrans.continuous.cdt pytranskit.optrans.continuous.clot pytranskit.optrans.continuous.radoncdt pytranskit.optrans.continuous.radoncdt3D pytranskit.optrans.continuous.scdt pytranskit.optrans.decomposition.cca pytranskit.optrans.decomposition.plda pytranskit.optrans.utils.data_utils pytranskit.optrans.utils.validation pytranskit.optrans.utils.visualize pytranskit.TBM.TBM_PLOT pytranskit.TBM.TBM_RCDT

N

n_components_ (pytranskit.optrans.decomposition.cca.CCA attribute) (pytranskit.optrans.decomposition.plda.PLDA attribute)

new_index_matrix() (in module pytranskit.classification.utils)

P

particle2image() (in module pytranskit.TBM.TBM_PLOT) particleApproximation() (in module pytranskit.TBM.TBM_PLOT) particleApproximation_v0() (in module pytranskit.TBM.TBM_PLOT) PLDA (class in pytranskit.optrans.decomposition.plda) PLOT_CCA (class in pytranskit.TBM.TBM_PLOT) plot_cca() (pytranskit.TBM.TBM_PLOT.PLOT_CCA method) plot_displacements2d() (in module pytranskit.optrans.utils.visualize) PLOT_NS_Classifier (class in pytranskit.TBM.TBM_PLOT) PLOT_PCA (class in pytranskit.TBM.TBM_PLOT) plot_pca() (pytranskit.TBM.TBM_PLOT.PLOT_PCA method) PLOT_PLDA (class in pytranskit.TBM.TBM_PLOT) plot_plda() (pytranskit.TBM.TBM_PLOT.PLOT_PLDA method) pLOT_single() (in module pytranskit.TBM.TBM_PLOT) predict() (pytranskit.classification.cdt_ns.CDT_NS method) (pytranskit.classification.rcdt_ns.RCDT_NS method) (pytranskit.classification.rcdt_ns_3d.RCDT_NS_3D method) (pytranskit.classification.scdt_nls.SCDT_NLS method) (pytranskit.classification.scdt_ns.SCDT_NS method) (pytranskit.optrans.decomposition.plda.PLDA method) (pytranskit.TBM.TBM_PLOT.PLOT_NS_Classifier method) (pytranskit.TBM.TBM_RCDT.RCDT_NS_Classifier method) predict_log_proba() (pytranskit.optrans.decomposition.plda.PLDA method) predict_proba() (pytranskit.optrans.decomposition.plda.PLDA method) predict_transformed() (pytranskit.optrans.decomposition.plda.PLDA method) pytranskit.classification.cdt_ns module pytranskit.classification.rcdt_ns module pytranskit.classification.rcdt_ns_3d module pytranskit.classification.scdt_nls module

pytranskit.classification.scdt_ns module pytranskit.classification.utils module pytranskit.optrans.continuous.base module pytranskit.optrans.continuous.cdt module pytranskit.optrans.continuous.clot module pytranskit.optrans.continuous.radoncdt module pytranskit.optrans.continuous.radoncdt3D module pytranskit.optrans.continuous.scdt module pytranskit.optrans.decomposition.cca module pytranskit.optrans.decomposition.plda module pytranskit.optrans.utils.data_utils module pytranskit.optrans.utils.validation module pytranskit.optrans.utils.visualize module pytranskit.TBM.TBM_PLOT module pytranskit.TBM.TBM_RCDT module

R

radon() (in module pytranskit.optrans.continuous.radoncdt) radon_3D() (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method) RadonCDT (class in pytranskit.optrans.continuous.radoncdt) RadonCDT3D (class in pytranskit.optrans.continuous.radoncdt3D) RCDT_CCA (class in pytranskit.TBM.TBM_RCDT) rcdt_cca() (pytranskit.TBM.TBM_RCDT.RCDT_CCA method) RCDT_NS (class in pytranskit.classification.rcdt_ns) RCDT_NS_3D (class in pytranskit.classification.rcdt_ns_3d)

RCDT_NS_Classifier (class in pytranskit.TBM.TBM_RCDT) rcdt_parallel() (pytranskit.classification.rcdt_ns.RCDT_NS method) (pytranskit.classification.rcdt_ns_3d.RCDT_NS_3D method) (pytranskit.TBM.TBM_RCDT.batch_RCDT method) RCDT_PCA (class in pytranskit.TBM.TBM_RCDT) rcdt_pca() (pytranskit.TBM.TBM_RCDT.RCDT_PCA method) RCDT_PLDA (class in pytranskit.TBM.TBM_RCDT) rcdt_plda() (pytranskit.TBM.TBM_RCDT.RCDT_PLDA method) rotate3D() (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method)

S

sample_sphere() (pytranskit.optrans.continuous.radoncdt3D.RadonCDT3D method) SCDT (class in pytranskit.optrans.continuous.scdt) SCDT_NLS (class in pytranskit.classification.scdt_nls) SCDT_NS (class in pytranskit.classification.scdt_ns) score() (pytranskit.classification.scdt_nls.SCDT_NLS method) (pytranskit.optrans.decomposition.cca.CCA method) (pytranskit.optrans.decomposition.plda.PLDA method) (pytranskit.TBM.TBM_PLOT.PLOT_NS_Classifier method) (pytranskit.TBM.TBM_RCDT.RCDT_NS_Classifier method)

set_params() (pytranskit.optrans.decomposition.plda.BaseEstimator method) signal_to_pdf() (in module pytranskit.optrans.continuous.cdt) (in module pytranskit.optrans.continuous.clot) (in module pytranskit.optrans.continuous.radoncdt) (in module pytranskit.optrans.continuous.radoncdt3D) (in module pytranskit.optrans.utils.data_utils) stransform() (pytranskit.optrans.continuous.scdt.SCDT method) sub2ind() (in module pytranskit.TBM.TBM_PLOT)

T

take_samples() (in module pytranskit.classification.utils) take_train_samples() (in module pytranskit.classification.utils) take_train_val_samples() (in module pytranskit.classification.utils) transform() (pytranskit.optrans.continuous.scdt.SCDT method) (pytranskit.optrans.decomposition.cca.CCA method) (pytranskit.optrans.decomposition.plda.PLDA method)

transport_map_ (pytranskit.optrans.continuous.cdt.CDT attribute) (pytranskit.optrans.continuous.clot.CDT attribute) (pytranskit.optrans.continuous.clot.CLOT attribute) (pytranskit.optrans.continuous.radoncdt.CDT attribute) (pytranskit.optrans.continuous.radoncdt.RadonCDT attribute) (pytranskit.optrans.continuous.radoncdt3D.CDT attribute) transport_map_initial_ (pytranskit.optrans.continuous.clot.CLOT attribute)

V

visualize() (pytranskit.TBM.TBM_PLOT.PLOT_CCA method) (pytranskit.TBM.TBM_PLOT.PLOT_PCA method) (pytranskit.TBM.TBM_PLOT.PLOT_PLDA method) (pytranskit.TBM.TBM_RCDT.RCDT_CCA method) (pytranskit.TBM.TBM_RCDT.RCDT_PCA method) (pytranskit.TBM.TBM_RCDT.RCDT_PLDA method)

Visualize_LOT() (in module pytranskit.TBM.TBM_PLOT)